Create a Seurat object used for heatmap generation.
Usage
create_seu_for_heatmaps(sce_dimred, calc_zscore = TRUE, spatial = FALSE)
Arguments
- sce_dimred
A SingleCellExperiment object with calculated dimreds.
- calc_zscore
A logical scalar: if TRUE, calculate z-scores of UMI counts in assays$RNA@scale.data slot.