This is a wrapper around data bundled in the Seurat package (cc.genes.updated.2019).
Usage
cc_genes_fn(sce_final_input_qc, organism, annotation_db_file)
Arguments
- sce_final_input_qc
(input target) A SingleCellExperiment object.
- organism
A character scalar: if "mouse", gene symbols will be converted to sentence-case (e.g. "Gapdh").
- annotation_db_file
A character scalar: path to AnnotationDbi SQLite file.
Value
A dataframe. Output target: cc_genes